Sequence Similarity Clusters for the Entities in PDB 1A7R

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46624
95 % 13 17 3803 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 13 21 3023
70 % 61 191 72
50 % 92 308 21
40 % 274 929 5
30 % 308 1056 7
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5834
95 % 13 17 3799 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 13 17 3846
70 % 13 36 1250
50 % 175 576 7
40 % 275 929 5
30 % 309 1056 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.