Sequence Similarity Clusters for the Entities in PDB 1A7R

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 45642
95 % 13 17 3723 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 13 21 2951
70 % 61 188 71
50 % 91 302 22
40 % 263 887 5
30 % 296 1013 7
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5694
95 % 13 17 3718 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 17 3762
70 % 13 36 1224
50 % 165 540 8
40 % 264 887 5
30 % 297 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.