Sequence Similarity Clusters for the Entities in PDB 1A7R

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 45341
95 % 13 17 3693 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 13 21 2930
70 % 61 187 74
50 % 91 301 22
40 % 262 882 5
30 % 295 1008 7
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5638
95 % 13 17 3688 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 13 17 3731
70 % 13 36 1215
50 % 164 536 8
40 % 263 882 5
30 % 296 1008 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.