Sequence Similarity Clusters for the Entities in PDB 1A7N

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45120
95 % 7 17 3672 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 7 21 2912
70 % 50 183 75
50 % 76 297 22
40 % 222 874 5
30 % 250 1000 7
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28210
95 % 7 17 3667 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 7 17 3712
70 % 7 32 1352
50 % 139 532 8
40 % 223 874 5
30 % 251 1000 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.