Sequence Similarity Clusters for the Entities in PDB 1A78

Entity #1 | Chains: A,B
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46007
95 % 1 2 20284 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 1 2 19721
70 % 1 2 18166
50 % 22 42 638
40 % 36 60 436
30 % 157 220 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q27 1 A, B Galectin-1 9606
2 4Q26 1 A, B, G, H Galectin-1 9606
3 4Q1P 1 A, B Galectin-1 9606
4 4Q2F 1 A, B Galectin-1 9606
5 4NO4 1 A, B, C, D, E, F Galectin-1 10116
6 4Q1R 1 A, B Galectin-1 9606
7 1IS3 1 A CONGERIN II 7943
8 3AJZ 1 A Ancestral congerin Con-anc
9 1C1L 1 A PROTEIN (CONGERIN I) COMPLEXED WITH LACTOSE CARBOHYDRATE-RECOGNITION-DOMAIN 7943
10 3AK0 1 A, B Ancestral congerin Con-anc
11 3WUC 1 A, B Galectin 8355
12 1WLD 1 A CONGERIN II 7943
13 1C1F 1 A PROTEIN (CONGERIN I) CARBOHYDRATE-RECOGNITION-DOMAIN 7943
14 3W58 1 A, B, C, D Galectin-1 9606
15 5DG2 1 A, B Galectin-2 9606
16 1IS6 1 A Congerin II 7943
17 1W6N 1 A GALECTIN-1 9606
18 1W6N 2 B GALECTIN-1 9606
19 3WUD 1 A Galectin 8355
20 1WLW 1 A Congerin II 7943
21 2YMZ 1 A, B, C, D, E, F GALECTIN 2 9031
22 5MWT 1 A, B Galectin-1 9606
23 1GZW 1 A GALECTIN-1 9606
24 1GZW 2 B GALECTIN-1 9606
25 1IS4 1 A CONGERIN II 7943
26 1SLT 1 A, B BOVINE GALECTIN-1 9913
27 1W6P 1 A GALECTIN-1 9606
28 1W6P 2 B GALECTIN-1 9606
29 3T2T 1 A, B Galectin-1 9606
30 1IS5 1 A Congerin II 7943
31 1W6O 1 A GALECTIN-1 9606
32 1W6O 2 B GALECTIN-1 9606
33 2ZKN 1 A, B Galectin-1 9606
34 1WLC 1 A Congerin II 7943
35 4GA9 1 A, B Galectin-1 10116
36 1A78 1 A, B GALECTIN-1 38577
37 3AJY 1 A, C Ancestral congerin Con-anc
38 5EWS 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P Galectin-2 9606
39 3OY8 1 A Galectin-1 9606
40 3OY8 2 B Galectin-1 9606
41 1QMJ 1 A, B BETA-GALACTOSIDE-BINDING LECTIN 9031
42 1SLC 1 A, B, C, D BOVINE GALECTIN-1 9913
43 1GAN 1 A, B GALECTIN-1 38577
44 3W59 1 A, B, C, D Galectin-1 9606
45 1SLB 1 A, B, C, D BOVINE GALECTIN-1 9913
46 3DUI 1 A, B Beta-galactoside-binding lectin 9031
47 1W6Q 1 A GALECTIN-1 9606
48 1W6Q 2 B GALECTIN-1 9606
49 1W6M 1 A GALECTIN-1 9606
50 1W6M 2 B GALECTIN-1 9606
51 3OYW 1 A Galectin-1 9606
52 3OYW 2 B Galectin-1 9606
53 4LBQ 1 A Galectin-1 10090
54 4LBQ 2 B, C Galectin-1 10090
55 4LBQ 3 D Galectin-1 10090
56 1SLA 1 A, B BOVINE GALECTIN-1 9913
57 1HLC 1 A, B HUMAN LECTIN 9606
58 3M2M 1 A, B, C, D, E, F, G, H Galectin-1 10116
59 5DG1 1 A, B, C, D, H, I Galectin-2 9606
60 2KM2 1 A, B Galectin-1 9606