Sequence Similarity Clusters for the Entities in PDB 1A78

Entity #1 | Chains: A,B
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23507
95 % 1 2 20990 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 1 2 20367
70 % 1 2 18681
50 % 23 43 655
40 % 37 61 451
30 % 162 230 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q27 1 A, B Galectin-1 9606
2 5MWX 1 A, B Galectin-1 9606
3 4Q26 1 A, B, G, H Galectin-1 9606
4 4Q1P 1 A, B Galectin-1 9606
5 4Q2F 1 A, B Galectin-1 9606
6 4NO4 1 A, B, C, D, E, F Galectin-1 10116
7 4Q1R 1 A, B Galectin-1 9606
8 1IS3 1 A CONGERIN II 7943
9 3AJZ 1 A Ancestral congerin Con-anc
10 1C1L 1 A PROTEIN (CONGERIN I) COMPLEXED WITH LACTOSE CARBOHYDRATE-RECOGNITION-DOMAIN 7943
11 3AK0 1 A, B Ancestral congerin Con-anc
12 3WUC 1 A, B Galectin 8355
13 1WLD 1 A CONGERIN II 7943
14 1C1F 1 A PROTEIN (CONGERIN I) CARBOHYDRATE-RECOGNITION-DOMAIN 7943
15 3W58 1 A, B, C, D Galectin-1 9606
16 5DG2 1 A, B Galectin-2 9606
17 1IS6 1 A Congerin II 7943
18 1W6N 1 A GALECTIN-1 9606
19 1W6N 2 B GALECTIN-1 9606
20 3WUD 1 A Galectin 8355
21 1WLW 1 A Congerin II 7943
22 2YMZ 1 A, B, C, D, E, F GALECTIN 2 9031
23 5MWT 1 A, B Galectin-1 9606
24 1GZW 1 A GALECTIN-1 9606
25 1GZW 2 B GALECTIN-1 9606
26 1IS4 1 A CONGERIN II 7943
27 1SLT 1 A, B BOVINE GALECTIN-1 9913
28 1W6P 1 A GALECTIN-1 9606
29 1W6P 2 B GALECTIN-1 9606
30 3T2T 1 A, B Galectin-1 9606
31 1IS5 1 A Congerin II 7943
32 1W6O 1 A GALECTIN-1 9606
33 1W6O 2 B GALECTIN-1 9606
34 2ZKN 1 A, B Galectin-1 9606
35 1WLC 1 A Congerin II 7943
36 4GA9 1 A, B Galectin-1 10116
37 1A78 1 A, B GALECTIN-1 38577
38 3AJY 1 A, C Ancestral congerin Con-anc
39 5EWS 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P Galectin-2 9606
40 3OY8 1 A Galectin-1 9606
41 3OY8 2 B Galectin-1 9606
42 1QMJ 1 A, B BETA-GALACTOSIDE-BINDING LECTIN 9031
43 1SLC 1 A, B, C, D BOVINE GALECTIN-1 9913
44 1GAN 1 A, B GALECTIN-1 38577
45 3W59 1 A, B, C, D Galectin-1 9606
46 1SLB 1 A, B, C, D BOVINE GALECTIN-1 9913
47 3DUI 1 A, B Beta-galactoside-binding lectin 9031
48 1W6Q 1 A GALECTIN-1 9606
49 1W6Q 2 B GALECTIN-1 9606
50 1W6M 1 A GALECTIN-1 9606
51 1W6M 2 B GALECTIN-1 9606
52 3OYW 1 A Galectin-1 9606
53 3OYW 2 B Galectin-1 9606
54 4LBQ 1 A Galectin-1 10090
55 4LBQ 2 B, C Galectin-1 10090
56 4LBQ 3 D Galectin-1 10090
57 1SLA 1 A, B BOVINE GALECTIN-1 9913
58 1HLC 1 A, B HUMAN LECTIN 9606
59 3M2M 1 A, B, C, D, E, F, G, H Galectin-1 10116
60 5DG1 1 A, B, C, D, H, I Galectin-2 9606
61 2KM2 1 A, B Galectin-1 9606