Sequence Similarity Clusters for the Entities in PDB 1A6W

Entity #1 | Chains: L
B1-8 FV (LIGHT CHAIN) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16554
95 % 3 12 2293 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 4 13 2264
70 % 4 13 2259
50 % 91 312 23
40 % 277 956 5
30 % 310 1085 7
Entity #2 | Chains: H
B1-8 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16502
95 % 1 3 15394 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 11 3007
70 % 18 86 268
50 % 179 599 6
40 % 278 956 5
30 % 311 1085 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures