Sequence Similarity Clusters for the Entities in PDB 1A6U

Entity #1 | Chains: L
B1-8 FV (LIGHT CHAIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39136
95 % 4 12 2311 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 4 12 2380
70 % 5 13 2232
50 % 120 317 23
40 % 134 361 27
30 % 1987 7175 1
Entity #2 | Chains: H
B1-8 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16493
95 % 2 3 15318 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 4 11 2915
70 % 21 87 261
50 % 225 609 6
40 % 1623 5756 1
30 % 1988 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures