Sequence Similarity Clusters for the Entities in PDB 1A6U

Entity #1 | Chains: L
B1-8 FV (LIGHT CHAIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15429
95 % 4 12 2132 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 13 2104
70 % 5 13 2103
50 % 118 301 22
40 % 331 884 5
30 % 376 1010 7
Entity #2 | Chains: H
B1-8 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15380
95 % 2 3 14428 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 11 2818
70 % 20 82 258
50 % 200 538 8
40 % 332 884 5
30 % 377 1010 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.