Sequence Similarity Clusters for the Entities in PDB 1A6U

Entity #1 | Chains: L
B1-8 FV (LIGHT CHAIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16125
95 % 4 12 2226 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 13 2194
70 % 5 13 2190
50 % 120 308 22
40 % 350 934 5
30 % 396 1062 7
Entity #2 | Chains: H
B1-8 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16072
95 % 2 3 15035 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 4 11 2932
70 % 21 85 263
50 % 217 581 7
40 % 351 934 5
30 % 397 1062 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures