Sequence Similarity Clusters for the Entities in PDB 1A6U

Entity #1 | Chains: L
B1-8 FV (LIGHT CHAIN) protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16271
95 % 4 12 2252 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 5 13 2223
70 % 5 13 2223
50 % 120 309 23
40 % 352 945 5
30 % 398 1074 7
Entity #2 | Chains: H
B1-8 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16218
95 % 2 3 15159 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 4 11 2964
70 % 21 85 266
50 % 219 591 7
40 % 353 945 5
30 % 399 1074 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures