Sequence Similarity Clusters for the Entities in PDB 1A6T

Entity #1 | Chains: A,C
IGG1 FAB1-IA FAB (LIGHT CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42616
95 % 1 1 35753 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 40 148 145
70 % 1216 2538 1
50 % 2493 5152 1
40 % 2856 5806 1
30 % 3498 7240 1
Entity #2 | Chains: B,D
IGG1 FAB1-IA FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42615
95 % 1 1 35752 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 34149
70 % 1208 2497 2
50 % 2494 5152 1
40 % 2857 5806 1
30 % 3499 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures