Sequence Similarity Clusters for the Entities in PDB 1A6T

Entity #1 | Chains: A,C
IGG1 FAB1-IA FAB (LIGHT CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41205
95 % 1 1 31337 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 39 145 142
70 % 1107 2327 1
50 % 2265 4713 1
40 % 2265 4713 1
30 % 2585 5567 1
Entity #2 | Chains: B,D
IGG1 FAB1-IA FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40531
95 % 1 1 30963 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 29739
70 % 1098 2280 2
50 % 2266 4713 1
40 % 2266 4713 1
30 % 2586 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.