Sequence Similarity Clusters for the Entities in PDB 1A6T

Entity #1 | Chains: A,C
IGG1 FAB1-IA FAB (LIGHT CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41833
95 % 1 1 31801 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 40 148 140
70 % 1148 2392 1
50 % 2347 4843 1
40 % 2347 4843 1
30 % 2674 5705 1
Entity #2 | Chains: B,D
IGG1 FAB1-IA FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41142
95 % 1 1 31418 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 30165
70 % 1137 2342 2
50 % 2348 4843 1
40 % 2348 4843 1
30 % 2675 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures