Sequence Similarity Clusters for the Entities in PDB 1A6D

Entity #1 | Chains: A
THERMOSOME (ALPHA SUBUNIT) protein, length: 545 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46910
95 % 1 2 38967 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 37143
70 % 1 2 32914
50 % 7 40 129
40 % 7 70 120
30 % 7 105 85
Entity #2 | Chains: B
THERMOSOME (BETA SUBUNIT) protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45561
95 % 1 2 37961 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 36205
70 % 1 2 32116
50 % 8 40 129
40 % 8 70 120
30 % 8 105 85

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures