Sequence Similarity Clusters for the Entities in PDB 1A6D

Entity #1 | Chains: A
THERMOSOME (ALPHA SUBUNIT) protein, length: 545 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47278
95 % 1 2 39253 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 37401
70 % 1 2 33117
50 % 7 40 129
40 % 7 70 121
30 % 7 105 95
Entity #2 | Chains: B
THERMOSOME (BETA SUBUNIT) protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45919
95 % 1 2 38250 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 36460
70 % 1 2 32314
50 % 8 40 129
40 % 8 70 121
30 % 8 105 95

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures