Sequence Similarity Clusters for the Entities in PDB 1A6D

Entity #1 | Chains: A
THERMOSOME (ALPHA SUBUNIT) protein, length: 545 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47964
95 % 1 2 39847 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 2 37960
70 % 1 2 33592
50 % 7 40 134
40 % 7 70 122
30 % 7 105 98
Entity #2 | Chains: B
THERMOSOME (BETA SUBUNIT) protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46575
95 % 1 2 38818 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 37000
70 % 1 2 32771
50 % 8 40 134
40 % 8 70 122
30 % 8 105 98

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures