Sequence Similarity Clusters for the Entities in PDB 1A6A

Entity #1 | Chains: A
HLA class II histocompatibility antigen, DR alpha chain protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 69 236
95 % 64 76 310
90 % 75 92 238
70 % 75 92 273
50 % 116 144 180
40 % 116 144 195
30 % 241 300 91
Entity #2 | Chains: B
HLA class II histocompatibility antigen, DR-1 beta chain protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59263
95 % 1 1 41277
90 % 62 73 337
70 % 109 135 166
50 % 116 144 179
40 % 116 144 194
30 % 242 300 91
Entity #3 | Chains: C
HLA class II histocompatibility antigen, gamma chain protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.