Sequence Similarity Clusters for the Entities in PDB 1A6A

Entity #1 | Chains: A
HLA class II histocompatibility antigen, DR alpha chain protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 71 228
95 % 65 78 289
90 % 76 94 229
70 % 76 94 264
50 % 117 146 173
40 % 117 146 187
30 % 243 304 83
Entity #2 | Chains: B
HLA class II histocompatibility antigen, DR-1 beta chain protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59620
95 % 1 1 41533
90 % 62 73 337
70 % 110 137 163
50 % 117 146 172
40 % 117 146 186
30 % 244 304 83
Entity #3 | Chains: C
HLA class II histocompatibility antigen, gamma chain protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.