Sequence Similarity Clusters for the Entities in PDB 1A61

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 328 42
95 % 179 329 57
90 % 179 329 61
70 % 179 331 71
50 % 179 331 95
40 % 179 331 120
30 % 179 331 132
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 158 283 51
95 % 196 367 33
90 % 198 374 35
70 % 198 398 40
50 % 198 398 70
40 % 995 1605 4
30 % 1072 1747 6
Entity #3 | Chains: I
HIRUGEN protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.