Sequence Similarity Clusters for the Entities in PDB 1A5Y

Entity #1 | Chains: A
PROTEIN TYROSINE PHOSPHATASE 1B protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55707
95 % 128 145 233 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.9
PDBFlex
90 % 128 145 245
70 % 128 145 280
50 % 128 146 304
40 % 128 146 319
30 % 226 261 161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures