Sequence Similarity Clusters for the Entities in PDB 1A5U

Entity #1 | Chains: A,B,C,D,E,F,G,H
PYRUVATE KINASE protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 1080
95 % 17 38 225 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 17 38 234
70 % 19 44 192
50 % 30 69 158
40 % 34 84 142
30 % 34 84 157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures