Sequence Similarity Clusters for the Entities in PDB 1A5S

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE (ALPHA CHAIN) protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 48 779
95 % 52 61 809 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 52 61 846
70 % 53 65 768
50 % 54 68 687
40 % 61 93 332
30 % 61 95 333
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE (BETA CHAIN) protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3205
95 % 52 63 782 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 52 63 810
70 % 52 64 833
50 % 60 85 333
40 % 60 85 352
30 % 61 86 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.