Sequence Similarity Clusters for the Entities in PDB 1A5O

Entity #1 | Chains: A
UREASE (GAMMA SUBUNIT) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 31 1301
95 % 31 31 1757 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 31 31 1796
70 % 44 44 1219
50 % 45 46 1034
40 % 45 46 1043
30 % 45 46 1022
Entity #2 | Chains: B
UREASE (BETA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 31 1299
95 % 31 31 1755
90 % 31 31 1794
70 % 31 31 1815
50 % 31 31 1831
40 % 31 31 1840
30 % 31 31 1782
Entity #3 | Chains: C
UREASE (ALPHA SUBUNIT) protein, length: 566 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30418
95 % 31 31 1719 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 31 31 1751
70 % 31 31 1775
50 % 44 49 896
40 % 44 49 918
30 % 44 49 899

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.