Sequence Similarity Clusters for the Entities in PDB 1A5N

Entity #1 | Chains: A
UREASE (GAMMA SUBUNIT) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 31 1315
95 % 25 31 1777
90 % 25 31 1815
70 % 38 44 1229
50 % 39 46 1043
40 % 39 46 1054
30 % 39 46 1035
Entity #2 | Chains: B
UREASE (BETA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 31 1313
95 % 25 31 1775
90 % 25 31 1813
70 % 25 31 1838
50 % 25 31 1856
40 % 25 31 1864
30 % 25 31 1801
Entity #3 | Chains: C
UREASE (ALPHA SUBUNIT) protein, length: 566 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30694
95 % 25 31 1738 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 25 31 1771
70 % 25 31 1795
50 % 38 49 902
40 % 38 49 928
30 % 38 49 910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.