Sequence Similarity Clusters for the Entities in PDB 1A5N

Entity #1 | Chains: A
UREASE (GAMMA SUBUNIT) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 31 1330
95 % 25 31 1798
90 % 25 31 1837
70 % 38 44 1242
50 % 39 46 1060
40 % 39 46 1067
30 % 39 46 1045
Entity #2 | Chains: B
UREASE (BETA SUBUNIT) protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 31 1328
95 % 25 31 1796
90 % 25 31 1835
70 % 25 31 1858
50 % 25 31 1879
40 % 25 31 1886
30 % 25 31 1824
Entity #3 | Chains: C
UREASE (ALPHA SUBUNIT) protein, length: 566 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31211
95 % 25 31 1757 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 25 31 1791
70 % 25 31 1815
50 % 38 49 914
40 % 38 49 938
30 % 38 49 915

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.