Sequence Similarity Clusters for the Entities in PDB 1A5H

Entity #1 | Chains: C,D
TISSUE PLASMINOGEN ACTIVATOR protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
TISSUE PLASMINOGEN ACTIVATOR protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15279
95 % 2 4 12214 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 4 12040
70 % 2 5 9857
50 % 2 5 8944
40 % 114 128 393
30 % 1691 1853 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures