Sequence Similarity Clusters for the Entities in PDB 1A5F

Entity #1 | Chains: L
MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58698
95 % 8 13 3667 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 59 83 296
70 % 1379 2264 1
50 % 2805 4587 1
40 % 2805 4587 1
30 % 3250 5392 1
Entity #2 | Chains: H
MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59011
95 % 1 1 41411
90 % 1 1 39474
70 % 1357 2222 2
50 % 2806 4587 1
40 % 2806 4587 1
30 % 3251 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.