Sequence Similarity Clusters for the Entities in PDB 1A5F

Entity #1 | Chains: L
MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59542
95 % 8 13 3717 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.3
PDBFlex
90 % 59 83 301
70 % 1392 2287 1
50 % 2830 4633 1
40 % 2830 4633 1
30 % 3286 5461 1
Entity #2 | Chains: H
MONOCLONAL ANTI-E-SELECTIN 7A9 ANTIBODY (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59859
95 % 1 1 42020
90 % 1 1 40037
70 % 1369 2244 2
50 % 2831 4633 1
40 % 2831 4633 1
30 % 3287 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.