Sequence Similarity Clusters for the Entities in PDB 1A50

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE (ALPHA CHAIN) protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 57 789
95 % 51 61 884 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 51 61 919
70 % 52 65 821
50 % 53 68 731
40 % 59 86 439
30 % 261 341 75
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE (BETA CHAIN) protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 23 2568
95 % 51 63 854 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 51 63 887
70 % 51 64 906
50 % 66 96 268
40 % 66 96 297
30 % 68 98 303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures