Sequence Similarity Clusters for the Entities in PDB 1A50

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE (ALPHA CHAIN) protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 57 798
95 % 51 61 894 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 51 61 927
70 % 52 65 822
50 % 53 68 738
40 % 59 86 446
30 % 266 346 73
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE (BETA CHAIN) protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 23 2590
95 % 51 63 862 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 51 63 894
70 % 51 64 911
50 % 69 100 251
40 % 69 100 281
30 % 71 102 287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures