Sequence Similarity Clusters for the Entities in PDB 1A50

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE (ALPHA CHAIN) protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 57 784
95 % 51 61 872 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 51 61 909
70 % 52 65 815
50 % 53 68 727
40 % 59 86 437
30 % 258 337 74
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE (BETA CHAIN) protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 23 2537
95 % 51 63 844 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 51 63 876
70 % 51 64 896
50 % 66 96 266
40 % 66 96 292
30 % 68 98 299

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures