Sequence Similarity Clusters for the Entities in PDB 1A4Y

Entity #1 | Chains: A,D
RIBONUCLEASE INHIBITOR protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7958
95 % 3 4 8424 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 3 4 8362
70 % 3 8 3935
50 % 4 9 3593
40 % 4 9 3468
30 % 4 9 3245
Entity #2 | Chains: B,E
ANGIOGENIN protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 3488
95 % 17 44 1002 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.8
PDBFlex
90 % 18 46 975
70 % 23 52 851
50 % 24 54 866
40 % 252 359 88
30 % 435 742 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures