Sequence Similarity Clusters for the Entities in PDB 1A4K

Entity #1 | Chains: A,L
ANTIBODY FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39077
95 % 10 16 2229 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 312 676 3
70 % 863 1822 2
50 % 2148 4489 1
40 % 2148 4489 1
30 % 2432 5290 1
Entity #2 | Chains: B,H
ANTIBODY FAB protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20259
95 % 2 2 17670 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 6 8 6091
70 % 1043 2172 1
50 % 2149 4489 1
40 % 2149 4489 1
30 % 2433 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.