Sequence Similarity Clusters for the Entities in PDB 1A4K

Entity #1 | Chains: A,L
ANTIBODY FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40264
95 % 10 17 2239 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.8
PDBFlex
90 % 321 701 3
70 % 1074 2287 1
50 % 2198 4633 1
40 % 2198 4633 1
30 % 2495 5461 1
Entity #2 | Chains: B,H
ANTIBODY FAB protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20932
95 % 2 2 18253 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 6 8 6307
70 % 1068 2244 2
50 % 2199 4633 1
40 % 2199 4633 1
30 % 2496 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.