Sequence Similarity Clusters for the Entities in PDB 1A4K

Entity #1 | Chains: A,L
ANTIBODY FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39682
95 % 10 17 2213 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 318 693 3
70 % 1064 2265 1
50 % 2178 4589 1
40 % 2178 4589 1
30 % 2466 5394 1
Entity #2 | Chains: B,H
ANTIBODY FAB protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 20607
95 % 2 2 17958 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 6 8 6231
70 % 1058 2223 2
50 % 2179 4589 1
40 % 2179 4589 1
30 % 2467 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.