Sequence Similarity Clusters for the Entities in PDB 1A4K

Entity #1 | Chains: A,L
ANTIBODY FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41141
95 % 10 17 2293 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 348 746 3
70 % 1134 2392 1
50 % 2318 4843 1
40 % 2318 4843 1
30 % 2628 5705 1
Entity #2 | Chains: B,H
ANTIBODY FAB protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21438
95 % 2 2 18647 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 6 8 6459
70 % 1123 2342 2
50 % 2319 4843 1
40 % 2319 4843 1
30 % 2629 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures