Sequence Similarity Clusters for the Entities in PDB 1A4K

Entity #1 | Chains: A,L
ANTIBODY FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41955
95 % 11 18 1990 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.9
PDBFlex
90 % 374 788 2
70 % 1180 2474 1
50 % 2412 5011 1
40 % 2412 5011 1
30 % 2766 5941 1
Entity #2 | Chains: B,H
ANTIBODY FAB protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21939
95 % 2 2 19043 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 6 8 6596
70 % 1169 2424 2
50 % 2413 5011 1
40 % 2413 5011 1
30 % 2767 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures