Sequence Similarity Clusters for the Entities in PDB 1A4J

Entity #1 | Chains: A,L
IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34947
95 % 7 24 1379 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.8
PDBFlex
90 % 301 832 2
70 % 947 2670 1
50 % 1942 5421 1
40 % 2243 6121 1
30 % 2709 7588 1
Entity #2 | Chains: B,H
IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25379
95 % 1 2 18697 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 2 8 6905
70 % 937 2629 2
50 % 1943 5421 1
40 % 2244 6121 1
30 % 2710 7588 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures