Sequence Similarity Clusters for the Entities in PDB 1A4J

Entity #1 | Chains: A,L
IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33880
95 % 4 18 2191 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.8
PDBFlex
90 % 283 783 1
70 % 915 2576 1
50 % 1875 5226 1
40 % 2171 5890 1
30 % 2630 7330 1
Entity #2 | Chains: B,H
IMMUNOGLOBULIN, DIELS ALDER CATALYTIC ANTIBODY (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24543
95 % 1 2 18059 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.6
PDBFlex
90 % 2 8 6690
70 % 904 2532 2
50 % 1876 5226 1
40 % 2172 5890 1
30 % 2631 7330 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures