Sequence Similarity Clusters for the Entities in PDB 1A43

Entity #1 | Chains: A
HIV-1 CAPSID protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7789
95 % 13 19 1509 Flexibility: Low
Max RMSD: 9.2, Avg RMSD: 1.7
PDBFlex
90 % 13 19 1538
70 % 13 19 1548
50 % 13 19 1603
40 % 13 19 1612
30 % 13 19 1593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures