Sequence Similarity Clusters for the Entities in PDB 1A3R

Entity #1 | Chains: L
IGG2A 8F5 FAB (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40217
95 % 2 13 3746 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 27 83 307
70 % 510 2327 1
50 % 1052 4713 1
40 % 1052 4713 1
30 % 1158 5567 1
Entity #2 | Chains: H
IGG2A 8F5 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40432
95 % 1 2 30900 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 3.0
PDBFlex
90 % 1 30 1150
70 % 510 2280 2
50 % 1053 4713 1
40 % 1053 4713 1
30 % 1159 5567 1
Entity #3 | Chains: P
HUMAN RHINOVIRUS CAPSID PROTEIN VP2 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.