Sequence Similarity Clusters for the Entities in PDB 1A3R

Entity #1 | Chains: L
IGG2A 8F5 FAB (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39951
95 % 2 13 3717 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.3
PDBFlex
90 % 27 83 301
70 % 497 2287 1
50 % 1027 4633 1
40 % 1027 4633 1
30 % 1131 5461 1
Entity #2 | Chains: H
IGG2A 8F5 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40166
95 % 1 2 30715 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 3.0
PDBFlex
90 % 1 30 1141
70 % 498 2244 2
50 % 1028 4633 1
40 % 1028 4633 1
30 % 1132 5461 1
Entity #3 | Chains: P
HUMAN RHINOVIRUS CAPSID PROTEIN VP2 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.