Sequence Similarity Clusters for the Entities in PDB 1A3R

Entity #1 | Chains: L
IGG2A 8F5 FAB (LIGHT CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41681
95 % 2 13 3890 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 2.4
PDBFlex
90 % 27 84 309
70 % 560 2479 1
50 % 1155 5021 1
40 % 1155 5021 1
30 % 1302 5951 1
Entity #2 | Chains: H
IGG2A 8F5 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41906
95 % 1 2 31965 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 3.0
PDBFlex
90 % 1 30 1199
70 % 560 2429 2
50 % 1156 5021 1
40 % 1156 5021 1
30 % 1303 5951 1
Entity #3 | Chains: P
HUMAN RHINOVIRUS CAPSID PROTEIN VP2 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures