Sequence Similarity Clusters for the Entities in PDB 1A3O

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43611
95 % 45 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 46 241 35
70 % 57 322 17
50 % 141 734 5
40 % 142 739 8
30 % 409 1182 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 159 53
95 % 46 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 47 245 32
70 % 60 336 13
50 % 142 734 5
40 % 143 739 8
30 % 410 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.