Sequence Similarity Clusters for the Entities in PDB 1A3O

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44829
95 % 45 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 46 246 21
70 % 58 327 15
50 % 143 744 4
40 % 144 749 8
30 % 416 1201 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 164 51
95 % 46 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 47 250 19
70 % 61 341 13
50 % 144 744 4
40 % 145 749 8
30 % 417 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures