Sequence Similarity Clusters for the Entities in PDB 1A3L

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 13G5 (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29854
95 % 2 3 26043 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 13 33 1003
70 % 433 2553 1
50 % 887 5180 1
40 % 1078 5834 1
30 % 1321 7269 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 13G5 (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29853
95 % 2 3 26042 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 25124
70 % 433 2511 2
50 % 888 5180 1
40 % 1079 5834 1
30 % 1322 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures