Sequence Similarity Clusters for the Entities in PDB 1A3L

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 13G5 (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27705
95 % 2 3 23099 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 13 33 963
70 % 383 2329 1
50 % 782 4717 1
40 % 782 4717 1
30 % 851 5571 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 13G5 (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27681
95 % 2 3 23079
90 % 2 3 22359
70 % 382 2282 2
50 % 783 4717 1
40 % 783 4717 1
30 % 852 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.