Sequence Similarity Clusters for the Entities in PDB 1A3L

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 13G5 (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28723
95 % 2 3 23908 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 13 33 997
70 % 426 2479 1
50 % 871 5021 1
40 % 871 5021 1
30 % 979 5951 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 13G5 (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 28699
95 % 2 3 23888
90 % 2 3 23117
70 % 425 2429 2
50 % 872 5021 1
40 % 872 5021 1
30 % 980 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures