Sequence Similarity Clusters for the Entities in PDB 1A3E

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 329 44
95 % 105 330 60
90 % 105 330 65
70 % 105 332 76
50 % 105 332 101
40 % 105 332 125
30 % 105 332 136
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 92 284 55
95 % 109 368 37
90 % 109 375 38
70 % 109 399 44
50 % 109 399 78
40 % 689 1623 4
30 % 729 1765 6
Entity #3 | Chains: I
Hirudin protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.