Sequence Similarity Clusters for the Entities in PDB 1A3E

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 338 45
95 % 112 339 62
90 % 112 339 66
70 % 112 341 78
50 % 112 341 107
40 % 112 341 130
30 % 112 341 137
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 96 290 58
95 % 116 377 35
90 % 116 384 39
70 % 116 408 46
50 % 116 408 84
40 % 748 1719 4
30 % 788 1869 6
Entity #3 | Chains: I
Hirudin protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures