Sequence Similarity Clusters for the Entities in PDB 1A3D

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11686
95 % 3 6 7330 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 10 22 2595
70 % 12 37 1564
50 % 27 119 378
40 % 85 314 107
30 % 85 314 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures