Sequence Similarity Clusters for the Entities in PDB 1A38

Entity #1 | Chains: A,B
14-3-3 PROTEIN ZETA protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 34 421
95 % 35 36 541 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 35 36 576
70 % 133 135 156
50 % 137 139 177
40 % 137 139 194
30 % 137 139 210
Entity #2 | Chains: P,Q
R18 PEPTIDE (PHCVPRDLSWLDLEANMCLP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49563
95 % 1 1 37112
90 % 1 1 35454
70 % 1 1 31571
50 % 1 1 27046
40 % 1 1 23943
30 % 1 1 20415

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.