Sequence Similarity Clusters for the Entities in PDB 1A38

Entity #1 | Chains: A,B
14-3-3 PROTEIN ZETA protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 36 393
95 % 37 38 507 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 37 38 540
70 % 141 143 149
50 % 145 147 166
40 % 145 147 180
30 % 145 147 192
Entity #2 | Chains: P,Q
R18 PEPTIDE (PHCVPRDLSWLDLEANMCLP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50543
95 % 1 1 37817
90 % 1 1 36094
70 % 1 1 32108
50 % 1 1 27488
40 % 1 1 24325
30 % 1 1 20723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures