Sequence Similarity Clusters for the Entities in PDB 1A38

Entity #1 | Chains: A,B
14-3-3 PROTEIN ZETA protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 31 482
95 % 32 33 613 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 32 33 644
70 % 128 130 164
50 % 132 134 185
40 % 132 134 201
30 % 132 134 214
Entity #2 | Chains: P,Q
R18 PEPTIDE (PHCVPRDLSWLDLEANMCLP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49237
95 % 1 1 36873
90 % 1 1 35229
70 % 1 1 31392
50 % 1 1 26892
40 % 1 1 23809
30 % 1 1 20298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.