Sequence Similarity Clusters for the Entities in PDB 1A38

Entity #1 | Chains: A,B
14-3-3 PROTEIN ZETA protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 26 543
95 % 26 27 723
90 % 27 28 719
70 % 109 111 175
50 % 113 115 197
40 % 113 115 216
30 % 113 115 224
Entity #2 | Chains: P,Q
R18 PEPTIDE (PHCVPRDLSWLDLEANMCLP) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46496
95 % 1 1 34814
90 % 1 1 33331
70 % 1 1 29825
50 % 1 1 25634
40 % 1 1 22698
30 % 1 1 19348

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.