Sequence Similarity Clusters for the Entities in PDB 1A34

Entity #1 | Chains: A
PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS) protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 1317
95 % 4 4 1765
90 % 4 4 1807
70 % 4 4 1832
50 % 4 4 1869
40 % 4 4 1870
30 % 4 4 1802
Entity #2 | Chains: B
RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures