Sequence Similarity Clusters for the Entities in PDB 1A34

Entity #1 | Chains: A
PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS) protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 1331
95 % 4 4 1794
90 % 4 4 1834
70 % 4 4 1859
50 % 4 4 1890
40 % 4 4 1894
30 % 4 4 1824
Entity #2 | Chains: B
RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures