Sequence Similarity Clusters for the Entities in PDB 1A34

Entity #1 | Chains: A
PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS) protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 1362
95 % 4 4 1842
90 % 4 4 1883
70 % 4 4 1900
50 % 4 4 1924
40 % 4 4 1922
30 % 4 4 1852
Entity #2 | Chains: B
RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures