Sequence Similarity Clusters for the Entities in PDB 1A30

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 31 555
95 % 424 574 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 460 636 2
70 % 479 663 5
50 % 487 689 3
40 % 497 699 7
30 % 499 701 13
Entity #2 | Chains: C
TRIPEPTIDE GLU-ASP-LEU protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.