Sequence Similarity Clusters for the Entities in PDB 1A30

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 37 449
95 % 436 587 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 472 649 2
70 % 491 676 5
50 % 499 702 5
40 % 509 712 9
30 % 511 714 14
Entity #2 | Chains: C
TRIPEPTIDE GLU-ASP-LEU protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures