Sequence Similarity Clusters for the Entities in PDB 1A2Y

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13684
95 % 1 17 3748
90 % 1 21 2970
70 % 7 188 72
50 % 17 303 21
40 % 63 897 5
30 % 72 1023 7
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5740
95 % 1 17 3743
90 % 1 17 3788
70 % 1 36 1231
50 % 45 549 8
40 % 64 897 5
30 % 73 1023 7
Entity #3 | Chains: C
LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65818
95 % 181 703 4
90 % 185 720 5
70 % 201 937 7
50 % 201 945 7
40 % 203 979 11
30 % 203 979 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.