Sequence Similarity Clusters for the Entities in PDB 1A2Y

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 12307
95 % 1 17 3359
90 % 1 19 2979
70 % 7 168 75
50 % 16 273 21
40 % 56 774 5
30 % 65 899 8
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5070
95 % 1 17 3356
90 % 1 17 3407
70 % 1 32 1245
50 % 39 456 8
40 % 57 774 5
30 % 66 899 8
Entity #3 | Chains: C
LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60031
95 % 149 636 4
90 % 153 653 5
70 % 168 868 6
50 % 168 877 6
40 % 170 911 10
30 % 170 911 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.