Sequence Similarity Clusters for the Entities in PDB 1A2X

Entity #1 | Chains: A
TROPONIN C protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49910
95 % 4 4 16938 Flexibility: Medium
Max RMSD: 11.7, Avg RMSD: 6.4
PDBFlex
90 % 10 16 3024
70 % 12 26 1765
50 % 108 238 105
40 % 125 361 40
30 % 156 432 42
Entity #2 | Chains: B
TROPONIN I protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49909
95 % 1 1 41309
90 % 1 1 39354
70 % 1 1 34805
50 % 1 1 29580
40 % 1 1 25928
30 % 1 1 21617

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures