Sequence Similarity Clusters for the Entities in PDB 1A2X

Entity #1 | Chains: A
TROPONIN C protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64401
95 % 4 4 19442 Flexibility: Medium
Max RMSD: 11.7, Avg RMSD: 6.4
PDBFlex
90 % 10 16 2913
70 % 12 26 1682
50 % 101 218 114
40 % 118 341 42
30 % 127 368 53
Entity #2 | Chains: B
TROPONIN I protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73755
95 % 1 1 51287
90 % 1 1 48648
70 % 1 1 42674
50 % 1 1 36400
40 % 1 1 32038
30 % 1 1 27092

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures