Sequence Similarity Clusters for the Entities in PDB 1A2K

Entity #1 | Chains: A,B
NUCLEAR TRANSPORT FACTOR 2 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 8938
95 % 11 12 2113
90 % 11 12 2177
70 % 11 12 2182
50 % 11 12 2165
40 % 14 15 1532
30 % 18 25 1031
Entity #2 | Chains: C,D,E
RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 40 580
95 % 39 63 314
90 % 40 66 326
70 % 42 69 352
50 % 42 69 411
40 % 43 70 435
30 % 493 728 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.