Sequence Similarity Clusters for the Entities in PDB 1A2A

Entity #1 | Chains: A,B,C,D,E,F,G,H
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9015
95 % 2 2 4942 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 4980
70 % 5 5 3592
50 % 178 184 156
40 % 295 312 104
30 % 295 312 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures