Sequence Similarity Clusters for the Entities in PDB 1A2A

Entity #1 | Chains: A,B,C,D,E,F,G,H
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8808
95 % 2 2 4840 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 4882
70 % 5 5 3517
50 % 175 181 152
40 % 290 307 103
30 % 290 307 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures