Sequence Similarity Clusters for the Entities in PDB 1A2A

Entity #1 | Chains: A,B,C,D,E,F,G,H
PHOSPHOLIPASE A2 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9251
95 % 2 2 5078 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 5111
70 % 5 5 3689
50 % 183 189 157
40 % 300 317 105
30 % 300 317 118

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures