Sequence Similarity Clusters for the Entities in PDB 1A1V

Entity #1 | Chains: B
DNA (5'-D(*UP*UP*UP*UP*UP*UP*UP*U)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (NS3 PROTEIN) protein, length: 476 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51223
95 % 4 8 4254
90 % 8 19 1440
70 % 8 19 1438
50 % 8 19 1491
40 % 8 19 1511
30 % 8 19 1487

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.