Sequence Similarity Clusters for the Entities in PDB 1A1R

Entity #1 | Chains: A,B
NS3 PROTEIN protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41925
95 % 21 30 845 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 55 64 356
70 % 72 89 243
50 % 72 89 260
40 % 72 89 274
30 % 72 89 282
Entity #2 | Chains: C,D
NS4A PROTEIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 29 635
95 % 22 31 778 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 22 31 807
70 % 22 31 850
50 % 22 31 902
40 % 22 31 929
30 % 22 31 910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.