Sequence Similarity Clusters for the Entities in PDB 1A1R

Entity #1 | Chains: A,B
NS3 PROTEIN protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42690
95 % 21 30 875 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 55 64 360
70 % 72 89 248
50 % 72 89 267
40 % 72 89 279
30 % 72 89 291
Entity #2 | Chains: C,D
NS4A PROTEIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 29 655
95 % 22 31 799 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 22 31 829
70 % 22 31 866
50 % 22 31 917
40 % 22 31 945
30 % 22 31 928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures