Sequence Similarity Clusters for the Entities in PDB 1A1R

Entity #1 | Chains: A,B
NS3 PROTEIN protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40825
95 % 21 30 829 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 55 64 345
70 % 72 89 222
50 % 72 89 252
40 % 72 89 269
30 % 72 89 279
Entity #2 | Chains: C,D
NS4A PROTEIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 29 621
95 % 22 31 769 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 22 31 795
70 % 22 31 841
50 % 22 31 883
40 % 22 31 908
30 % 22 31 893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.