Sequence Similarity Clusters for the Entities in PDB 1A1R

Entity #1 | Chains: A,B
NS3 PROTEIN protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43203
95 % 21 30 879 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 55 64 366
70 % 72 89 247
50 % 72 89 268
40 % 72 89 280
30 % 72 89 294
Entity #2 | Chains: C,D
NS4A PROTEIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 29 659
95 % 22 31 801 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 22 31 831
70 % 22 31 873
50 % 22 31 922
40 % 22 31 948
30 % 22 31 933

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures