Sequence Similarity Clusters for the Entities in PDB 1A1R

Entity #1 | Chains: A,B
NS3 PROTEIN protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7557
95 % 21 30 888 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 55 64 369
70 % 72 89 251
50 % 72 89 276
40 % 72 89 304
30 % 72 89 316
Entity #2 | Chains: C,D
NS4A PROTEIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 31 666
95 % 22 31 809 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.3
PDBFlex
90 % 22 31 836
70 % 22 31 880
50 % 22 31 939
40 % 22 31 957
30 % 22 31 944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures