Sequence Similarity Clusters for the Entities in PDB 1A1Q

Entity #1 | Chains: A,B,C
NS3 PROTEINASE protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 6623
95 % 17 25 763 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 17 25 786
70 % 67 89 247
50 % 67 89 269
40 % 67 89 297
30 % 67 89 314

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures