Sequence Similarity Clusters for the Entities in PDB 1A1O

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 36844
95 % 98 134 218
90 % 142 200 132
70 % 343 692 6
50 % 344 697 6
40 % 367 748 10
30 % 393 868 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 319 600 2
95 % 346 644 3
90 % 349 653 4
70 % 415 885 4
50 % 423 907 3
40 % 423 907 9
30 % 423 907 14
Entity #3 | Chains: C
PEPTIDE LS6 (KPIVQYDNF) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.