Sequence Similarity Clusters for the Entities in PDB 1A1O

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 34580
95 % 90 124 213
90 % 129 179 143
70 % 323 644 7
50 % 324 649 7
40 % 340 691 11
30 % 364 807 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 297 558 2
95 % 324 601 3
90 % 327 610 4
70 % 390 837 5
50 % 396 857 5
40 % 396 857 9
30 % 396 857 13
Entity #3 | Chains: C
PEPTIDE LS6 (KPIVQYDNF) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.