Sequence Similarity Clusters for the Entities in PDB 1A1M

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34216
95 % 98 124 205
90 % 143 179 141
70 % 380 638 7
50 % 381 643 7
40 % 404 685 11
30 % 437 801 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 340 552 2
95 % 369 595 3
90 % 372 604 4
70 % 463 831 5
50 % 473 851 5
40 % 473 851 9
30 % 473 851 12
Entity #3 | Chains: C
PEPTIDE TPYDINQML protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.