Sequence Similarity Clusters for the Entities in PDB 1A1I

Entity #1 | Chains: B
DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
RADR ZIF268 ZINC FINGER PEPTIDE protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27428
95 % 3 16 3558
90 % 3 16 3597
70 % 3 18 2780
50 % 7 34 1346
40 % 7 181 242
30 % 7 193 230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.