Sequence Similarity Clusters for the Entities in PDB 1A14

Entity #1 | Chains: N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 24 1740
95 % 36 44 1059 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 51 59 804
70 % 59 67 501
50 % 118 147 178
40 % 118 147 196
30 % 136 170 148
Entity #2 | Chains: H
NC10 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28954
95 % 2 4 14741 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 4 14472
70 % 37 82 259
50 % 327 566 7
40 % 530 916 5
30 % 592 1042 7
Entity #3 | Chains: L
NC10 FV (LIGHT CHAIN) protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29206
95 % 2 4 14811 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 8 6420
70 % 114 191 72
50 % 180 305 21
40 % 531 916 5
30 % 593 1042 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.