Sequence Similarity Clusters for the Entities in PDB 1A14

Entity #1 | Chains: N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 24 1788
95 % 36 44 1084 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 51 59 826
70 % 59 67 547
50 % 118 147 184
40 % 118 147 200
30 % 136 170 151
Entity #2 | Chains: H
NC10 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29595
95 % 2 4 15061 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 4 14795
70 % 39 85 265
50 % 335 583 7
40 % 540 936 5
30 % 604 1065 7
Entity #3 | Chains: L
NC10 FV (LIGHT CHAIN) protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29845
95 % 2 4 15134 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 8 6572
70 % 114 191 73
50 % 182 308 22
40 % 541 936 5
30 % 605 1065 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures