Sequence Similarity Clusters for the Entities in PDB 1A14

Entity #1 | Chains: N
NEURAMINIDASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 24 1719
95 % 36 44 1050 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 51 59 801
70 % 59 67 494
50 % 118 147 176
40 % 118 147 191
30 % 136 170 144
Entity #2 | Chains: H
NC10 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28436
95 % 2 4 14499 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 4 14227
70 % 37 82 258
50 % 310 540 8
40 % 512 887 5
30 % 574 1013 7
Entity #3 | Chains: L
NC10 FV (LIGHT CHAIN) protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28685
95 % 2 4 14562 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 5 8 6332
70 % 114 188 71
50 % 179 302 22
40 % 513 887 5
30 % 575 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.