Sequence Similarity Clusters for the Entities in PDB 1A0U

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 222 22
95 % 130 250 19
90 % 131 251 20
70 % 157 332 14
50 % 378 754 4
40 % 383 759 8
30 % 796 1214 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 169 50
95 % 138 250 18
90 % 141 255 19
70 % 172 346 11
50 % 379 754 4
40 % 384 759 8
30 % 797 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures