Sequence Similarity Clusters for the Entities in PDB 1A0T

Entity #1 | Chains: P,Q,R
SUCROSE-SPECIFIC PORIN protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8080
95 % 3 4 7595 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 4 7542
70 % 3 4 7346
50 % 3 4 6767
40 % 3 4 6304
30 % 3 4 5636

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures