Sequence Similarity Clusters for the Entities in PDB 1A0T

Entity #1 | Chains: P,Q,R
SUCROSE-SPECIFIC PORIN protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8659
95 % 3 4 8342 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 4 8268
70 % 3 4 7958
50 % 3 4 6999
40 % 3 4 6742
30 % 3 4 5907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures