Sequence Similarity Clusters for the Entities in PDB 1A0S

Entity #1 | Chains: P,Q,R
SUCROSE-SPECIFIC PORIN protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 8911
95 % 4 4 8562 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 4 4 8496
70 % 4 4 8191
50 % 4 4 7177
40 % 4 4 6929
30 % 4 4 6059

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2E01 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details
2 3GCB 1 A GAL6 4932 3.4.22.40 | Details
3 1A6R 1 A GAL6 4932 3.4.22.40 | Details
4 2E00 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details
5 2DZZ 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details
6 2E03 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details
7 1GCB 1 A GAL6 HG (EMTS) DERIVATIVE 4932 3.4.22.40 | Details
8 2E02 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details
9 2DZY 1 A Cysteine proteinase 1 4932 3.4.22.40 | Details