Sequence Similarity Clusters for the Entities in PDB 1A0R

Entity #1 | Chains: B
TRANSDUCIN (BETA SUBUNIT) protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 13693
95 % 20 30 1460
90 % 20 30 1485
70 % 20 30 1519
50 % 21 31 1469
40 % 21 33 1409
30 % 21 33 1384
Entity #2 | Chains: G
TRANSDUCIN (GAMMA SUBUNIT) protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6893
95 % 4 6 7433
90 % 4 6 7403
70 % 4 6 7161
50 % 4 6 6631
40 % 4 6 6174
30 % 4 6 5508
Entity #3 | Chains: P
PHOSDUCIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54448
95 % 1 1 38423
90 % 1 1 36776
70 % 1 3 18844
50 % 1 3 16405
40 % 1 3 14654
30 % 1 3 12528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.