Sequence Similarity Clusters for the Entities in PDB 1A0R

Entity #1 | Chains: B
TRANSDUCIN (BETA SUBUNIT) protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 13541
95 % 20 30 1445
90 % 20 30 1470
70 % 20 30 1507
50 % 21 31 1455
40 % 21 33 1393
30 % 21 33 1372
Entity #2 | Chains: G
TRANSDUCIN (GAMMA SUBUNIT) protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6824
95 % 4 6 7360
90 % 4 6 7329
70 % 4 6 7085
50 % 4 6 6572
40 % 4 6 6133
30 % 4 6 5475
Entity #3 | Chains: P
PHOSDUCIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53916
95 % 1 1 38059
90 % 1 1 36431
70 % 1 3 18653
50 % 1 3 16242
40 % 1 3 14510
30 % 1 3 12402

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.