Sequence Similarity Clusters for the Entities in PDB 1A0Q

Entity #1 | Chains: L
29G11 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61637
95 % 3 8 7154 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 4 9 6458
70 % 930 2385 1
50 % 1905 4827 1
40 % 1905 4827 1
30 % 2154 5688 1
Entity #2 | Chains: H
29G11 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60985
95 % 1 1 42792
90 % 2 2 30088
70 % 918 2334 2
50 % 1906 4827 1
40 % 1906 4827 1
30 % 2155 5688 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures