Sequence Similarity Clusters for the Entities in PDB 1A0Q

Entity #1 | Chains: L
29G11 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62125
95 % 3 8 7211 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 4 9 6505
70 % 945 2416 1
50 % 1935 4892 1
40 % 1935 4892 1
30 % 2187 5759 1
Entity #2 | Chains: H
29G11 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61466
95 % 1 1 43122
90 % 2 2 30308
70 % 933 2366 2
50 % 1936 4892 1
40 % 1936 4892 1
30 % 2188 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures