Sequence Similarity Clusters for the Entities in PDB 1A0Q

Entity #1 | Chains: L
29G11 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63033
95 % 3 8 7338 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 4 9 6625
70 % 978 2479 1
50 % 2003 5021 1
40 % 2003 5021 1
30 % 2294 5951 1
Entity #2 | Chains: H
29G11 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62360
95 % 1 1 43724
90 % 2 2 30736
70 % 966 2429 2
50 % 2004 5021 1
40 % 2004 5021 1
30 % 2295 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures