Sequence Similarity Clusters for the Entities in PDB 1A0Q

Entity #1 | Chains: L
29G11 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61269
95 % 3 8 7104 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 4 9 6416
70 % 919 2362 1
50 % 1883 4781 1
40 % 1883 4781 1
30 % 2125 5635 1
Entity #2 | Chains: H
29G11 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60626
95 % 1 1 42572
90 % 2 2 29908
70 % 907 2311 2
50 % 1884 4781 1
40 % 1884 4781 1
30 % 2126 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures