Sequence Similarity Clusters for the Entities in PDB 1A0Q

Entity #1 | Chains: L
29G11 FAB (LIGHT CHAIN) protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49010
95 % 3 8 7516 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 4 9 6735
70 % 987 2519 1
50 % 2023 5107 1
40 % 2335 5756 1
30 % 2853 7175 1
Entity #2 | Chains: H
29G11 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49011
95 % 1 1 40586
90 % 2 2 27841
70 % 978 2478 2
50 % 2024 5107 1
40 % 2336 5756 1
30 % 2854 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures