Sequence Similarity Clusters for the Entities in PDB 1A0O

Entity #1 | Chains: A,C,E,G
CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 26 965
95 % 67 74 325 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 68 75 334
70 % 68 75 379
50 % 77 84 420
40 % 87 95 410
30 % 215 262 124
Entity #2 | Chains: B,D,F,H
CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7064
95 % 4 5 6626 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 5 6686
70 % 4 5 6485
50 % 4 5 6051
40 % 4 5 5624
30 % 4 5 4954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures