Sequence Similarity Clusters for the Entities in PDB 1A0O

Entity #1 | Chains: A,C,E,G
CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 1662
95 % 67 74 322 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 68 75 337
70 % 68 75 379
50 % 77 84 422
40 % 87 95 401
30 % 212 261 117
Entity #2 | Chains: B,D,F,H
CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11135
95 % 4 5 6698 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 5 6693
70 % 4 5 6519
50 % 4 5 6086
40 % 4 5 5696
30 % 4 5 5112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures