Sequence Similarity Clusters for the Entities in PDB 1A0O

Entity #1 | Chains: A,C,E,G
CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 1577
95 % 67 74 300 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 68 75 312
70 % 68 75 355
50 % 77 84 384
40 % 86 93 359
30 % 209 256 114
Entity #2 | Chains: B,D,F,H
CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10590
95 % 4 5 6406 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 5 6389
70 % 4 5 6244
50 % 4 5 5833
40 % 4 5 5463
30 % 4 5 4903

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.