Sequence Similarity Clusters for the Entities in PDB 1A0O

Entity #1 | Chains: A,C,E,G
CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 1607
95 % 67 74 310 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 68 75 322
70 % 68 75 367
50 % 77 84 400
40 % 86 93 383
30 % 209 256 116
Entity #2 | Chains: B,D,F,H
CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10735
95 % 4 5 6498 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 5 6480
70 % 4 5 6325
50 % 4 5 5911
40 % 4 5 5537
30 % 4 5 4967

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures