Sequence Similarity Clusters for the Entities in PDB 1A0H

Entity #1 | Chains: A,D
MEIZOTHROMBIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45053
95 % 1 1 33975 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 32444
70 % 2 2 21575
50 % 2 2 18639
40 % 2 2 16599
30 % 2 2 14196
Entity #2 | Chains: B,E
MEIZOTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 1242
95 % 19 22 1670 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 19 22 1703
70 % 391 408 46
50 % 391 408 84
40 % 1802 1863 4
30 % 1818 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures