Sequence Similarity Clusters for the Entities in PDB 1A0H

Entity #1 | Chains: A,D
MEIZOTHROMBIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44835
95 % 1 1 40652 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 33327
70 % 2 2 24988
50 % 2 2 21970
40 % 2 2 20083
30 % 2 2 17988
Entity #2 | Chains: B,E
MEIZOTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 1425
95 % 19 22 1899 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 19 22 1940
70 % 367 383 72
50 % 367 383 95
40 % 369 385 111
30 % 1845 1912 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures