Sequence Similarity Clusters for the Entities in PDB 1A0H

Entity #1 | Chains: A,D
MEIZOTHROMBIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44516
95 % 1 1 33582 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 32083
70 % 2 2 21335
50 % 2 2 18447
40 % 2 2 16432
30 % 2 2 14051
Entity #2 | Chains: B,E
MEIZOTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 1229
95 % 19 22 1649 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 19 22 1683
70 % 391 408 46
50 % 391 408 84
40 % 1669 1721 4
30 % 1808 1871 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures