Sequence Similarity Clusters for the Entities in PDB 1A0H

Entity #1 | Chains: A,D
MEIZOTHROMBIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43532
95 % 1 1 32891 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 31456
70 % 2 2 20922
50 % 2 2 18101
40 % 2 2 16136
30 % 2 2 13801
Entity #2 | Chains: B,E
MEIZOTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 1197
95 % 19 22 1608 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 19 22 1637
70 % 388 405 45
50 % 388 405 81
40 % 1644 1695 4
30 % 1783 1845 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.