Sequence Similarity Clusters for the Entities in PDB 1A0A

Entity #1 | Chains: C
DNA (5'-D(*CP*TP*CP*AP*CP*AP*CP*GP*TP*GP*GP*GP*AP*CP*TP*AP*G )-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(*CP*TP*AP*GP*TP*CP*CP*CP*AP*CP*GP*TP*GP*TP*GP*AP*G )-3') dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4) protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48555
95 % 1 1 36270 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 2.6
PDBFlex
90 % 1 1 34653
70 % 1 1 30821
50 % 1 1 26355
40 % 1 1 23265
30 % 1 1 19744

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.