Sequence Similarity Clusters for the Entities in PDB 15C8

Entity #1 | Chains: L
IGG 5C8 FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27816
95 % 4 6 10503
90 % 35 145 142
70 % 1066 2327 1
50 % 2178 4713 1
40 % 2178 4713 1
30 % 2471 5567 1
Entity #2 | Chains: H
IGG 5C8 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27679
95 % 3 3 23075 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 9 18 1827
70 % 1055 2280 2
50 % 2179 4713 1
40 % 2179 4713 1
30 % 2472 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.