Sequence Similarity Clusters for the Entities in PDB 15C8

Entity #1 | Chains: L
IGG 5C8 FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28462
95 % 4 8 5943
90 % 36 148 140
70 % 1125 2426 1
50 % 2297 4913 1
40 % 2297 4913 1
30 % 2600 5780 1
Entity #2 | Chains: H
IGG 5C8 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28321
95 % 3 3 23580 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 10 19 1750
70 % 1112 2376 2
50 % 2298 4913 1
40 % 2298 4913 1
30 % 2601 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures