Sequence Similarity Clusters for the Entities in PDB 15C8

Entity #1 | Chains: L
IGG 5C8 FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28821
95 % 4 8 6020
90 % 36 148 144
70 % 1151 2474 1
50 % 2350 5011 1
40 % 2350 5011 1
30 % 2694 5941 1
Entity #2 | Chains: H
IGG 5C8 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28681
95 % 3 3 23876 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.2
PDBFlex
90 % 10 19 1787
70 % 1138 2424 2
50 % 2351 5011 1
40 % 2351 5011 1
30 % 2695 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures