Sequence Similarity Clusters for the Entities in PDB 12E8

Entity #1 | Chains: L,M
IGG1-KAPPA 2E8 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12323
95 % 5 10 3593
90 % 13 66 415
70 % 389 1803 2
50 % 987 4435 1
40 % 987 4435 1
30 % 1083 5225 1
Entity #2 | Chains: H,P
IGG1-KAPPA 2E8 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20022
95 % 1 3 11796
90 % 1 3 11620
70 % 478 2145 1
50 % 988 4435 1
40 % 988 4435 1
30 % 1084 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.