Sequence Similarity Clusters for the Entities in PDB 12E8

Entity #1 | Chains: L,M
IGG1-KAPPA 2E8 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12728
95 % 5 10 3694
90 % 13 68 419
70 % 493 2280 1
50 % 1019 4619 1
40 % 1019 4619 1
30 % 1120 5440 1
Entity #2 | Chains: H,P
IGG1-KAPPA 2E8 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20722
95 % 1 3 12195
90 % 1 3 12019
70 % 494 2238 2
50 % 1020 4619 1
40 % 1020 4619 1
30 % 1121 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.