Sequence Similarity Clusters for the Entities in PDB 12E8

Entity #1 | Chains: L,M
IGG1-KAPPA 2E8 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 11515
95 % 5 9 3929
90 % 10 57 441
70 % 357 1648 3
50 % 897 4012 1
40 % 897 4014 1
30 % 980 4750 1
Entity #2 | Chains: H,P
IGG1-KAPPA 2E8 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18771
95 % 1 3 11094
90 % 1 3 10933
70 % 437 1945 1
50 % 898 4012 1
40 % 898 4014 1
30 % 981 4750 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.